dynamic BIOSENSORS DC-0 v5.1 Density Control Kit User Manual

August 27, 2024
dynamic BIOSENSORS

dynamic BIOSENSORS DC-0 v5.1 Density Control Kit

Key Features

  • Complementary Anchor strand 1 and complementary Anchor strand 2 for low density generation of heliX ®
  • Adapter Chip Spot 1 and Spot 2.
  • Compatible with heliX ® Adapter Chip.
  • Ideal for MIX RUN  sample preparation.
  • This kit enables to modulate the ligand density on the sensor surface.

® Adapter Chip Overview

2 spots with 2 different anchor sequences for DNA-encoded addressing.

Product Description

Order Number: DC-0

Table 1. Contents and Storage Information

Material| Cap| Concentration| Amount| Buffer| Storage
---|---|---|---|---|---
cAnchor strand 1| Red| 200 nM| 5 x 200 µL| TE40 [1]| -20°C
cAnchor strand 2| Red| 200 nM| 5 x 200 µL| TE40 [1]| -20°C

For research use only.

This product has a limited shelf life, please see expiry date on label.

To avoid many freeze thaw cycles please aliquot the nanolayer.

Preparation | MIX RUN

In-solution hybridization of adapter and ligand strands:

  1. Mix Adapter strand 1 – Ra (400 nM) and conjugated Ligand strand (500 nM) at 1:1 ratio (v/v).
  2. Incubate the solution of step 1 at RT at 600 rpm for 30 min to ensure complete hybridization.
  3. Mix solution of step 2 and Adapter strand 2 – Ra – lfs (200 nM) at 1:1 ratio (v/v). Solution is ready to use for biochip functionalization Stability of the solution is related to the stability of the ligand mole

Preparation | Ligand Density Variation
Easy modulation of ligand density on the sensor surface:

  1. Mix cantor strand 1 and Anchor strand 2 at 1:1 ratio (v/v).
  2. Mix solution of step 3 and solution of step 4 at the ratio of desired on-chip density, e.g.:
    • a. 1:1 ratio (v/v) for a 50% ligand density
    • b. 1:2 ratio (v/v) for a 30% ligand density
    • c. 1:9 ratio (v/v) for a 10% ligand density
      Solution is ready to use for biochip functionalization

Example

Required volume for 3 functionalizations: 100 µL with a final ligand density of 10 %.

Vial 4 Vial 4

Adapter strand 1 – Ra with ligand (100 nM) Adapter strand 2 – Ra – lfs (100 nM)| cAnchor strand 1 (200| cAnchor strand 2 (200 nM
10 µL| 45 µ| 45 µL

Mix vial 3 and vial 4 to obtain 100 µL of ready-to-use DNA solution.

Useful Order Numbers

Product Comment Order No
heliX ® Adapter Chip Chip with 2 detection spots ADP-48-2-0
heliX ® Amine Coup For five individual conjugation reactio HK-NHS-1
Adapter strand 1 – R 400 nM AS-1-Ra
Adapter strand 2 – 200 nM, prehybridized with Ligand-free stran AS-2-Ra

Customer Support

Contact
Dynamic Biosensors GmbH
Perchtinger Str. 8/10
81379 Munich
Germany
Dynamic Biosensors, Inc.
300 Trade Center, Suite 1400
Woburn, MA 01801
USA
Order Information order@dynamic-biosensors.com
Technical Support support@dynamic-biosensors.com
www.dynamic-biosensors.com
Instruments and chips are engineered and manufactured in Germany.
©2024 Dynamic Biosensors GmbH | Dynamic Biosensors, Inc. All rights reserved.
[1] TE40: 10 mM Tris, 40 mM NaCl, 0.05 % Tween20, 50 μM EDTA, 50 μM EGTA
www.dynamic-biosensors.co

References

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