Promega Sexual Assault Evidence Kit User Manual
- August 19, 2024
- Promega
Table of Contents
- Sexual Assault Evidence Kit
- Description
- Product Components and Storage Conditions
- Before You Begin
- Sample Preprocessing
- Preparing the Maxwell® DE System Cartridge for Use with the Maxwell® FSC,
- Storing and Using Non-Sperm and Sperm Fractions in Downstream
- Troubleshooting
- Related Products
- References
- Read User Manual Online (PDF format)
- Download This Manual (PDF format)
TECHNICAL MANUAL
Maxwell®DE System
Instructions for Use of Product
AS1870
6/24 TM734
Sexual Assault Evidence Kit
All technical literature is available at:
www.promega.com/protocols/
Visit the website to verify that you are using the most current version of
this Technical Manual.
Email Promega Technical Services if you have questions on use of this system:
genetic@promega.com
Description
Sexual assault evidence kit (SAEK) samples are commonly comprised of a mixture
of non-sperm and sperm cells from multiple individuals. DNA enrichment from
sperm cells can improve the chances of obtaining a usable and interpretable
short tandem repeat (STR) profile for the sperm contributor.
The Maxwell® DE System(a) is a differential extraction system designed
specifically for forensic laboratories. This system employs novel paramagnetic
particles to generate sperm and non-sperm fractions from mixed biological
samples, such as those commonly found in SAEKs, for use in downstream PCR
quantification and STR analysis applications.
Product Components and Storage Conditions
PRODUCT | SIZE | CAT.# |
---|---|---|
Maxwell® DE System | 48 preps | AS1870 |
Not For Medical Diagnostic Use. Sufficient for 48 automated isolations from forensic casework samples. Includes:
- 900µl 1-Thioglycerol
- 2 × 1ml Proteinase K
- 60ml Maxwell® DE Resuspension Buffer
- 20ml Maxwell ® DE Elution Buffer
- 30ml Maxwell ® DE Lysis Buffer
- 25ml Nuclease-Free Water
- 48 Maxwell ® DE Cartridges
- 48 Maxwell ® RSC Plunger Pack
- 50 Elution Tubes, 0.5ml
- 50 DNA IQ™ Spin Baskets
- 100 ClickFit Microtube, 1.5 ml
Storage Conditions: Store the components of Maxwell® DE System at +15°C to +30°C. Upon receipt, store 1-Thioglycerol at +2°C to +10°C.
Safety Information: The Maxwell® DE Cartridges contain the flammable
substance ethanol. 1-Thioglycerol is a toxic substance. We highly recommend
the use of gloves and aerosol-resistant pipette tips.
Maxwell® DE Cartridges are designed to be used with potentially infectious
substances. Wear appropriate protection (e.g., gloves and goggles) when
handling infectious substances. Adhere to your institutional guidelines for
the handling and disposal of all infectious substances when used with this
system.
Caution: Handle cartridges with care; edges may be sharp.
Additional Information: Do not use cartridges if the seal on the
cartridge is not intact on receipt. For additional safety information, see the
Safety Data Sheet, available at: www.promega.com
Before You Begin
The quality of a differential extraction from any sample can be influenced by sample age, substrate and environmental storage conditions.
Materials to Be Supplied By the User
-
Maxwell® FSC (Cat.# AS4600), Maxwell ® RSC (Cat.# AS4500), or Maxwell ® RSC 48 (Cat.# AS8500) Instrument with the method installed for the Maxwell ® DE System.
If needed, the method can be downloaded at: www.promega.com/resources /software-firmware/maxwell-maxprep/maxwell-rsc-fsc-software-firmware- methods/ -
70°C heat block or water bath, compatible with 1.5ml tubes
-
95°C heat block or water bath, compatible with 0.5ml tubes
-
95°C heat block or water bath, compatible with 1.5ml tubes
-
aerosol-resistant pipette tips
-
microcentrifuge with rotor compatible with 1.5ml ClickFit tubes and capable of 16,000–20,000 × g
Sample Preprocessing
The instructions in this section describe the manual steps necessary for preprocessing samples, including those on a solid support, such as swabs or fabric, in individual tubes. This preprocessing protocol can differentially extract from these samples.
4.A. Preparing Diluted 1-Thioglycerol
Add 5µl of 1-Thioglycerol to 45µl of Nuclease-Free Water. Vortex for 10
seconds at maximum speed to thoroughly mix.
Notes:
a. 1-Thioglycerol is viscous. Pipette slowly for accuracy. Use the recommended
dilution and do not pipet less than 5µl for accuracy.
b. Dilute 1-Thioglycerol fresh for each use. Do not store the dilution.
c. This volume of diluted 1-Thioglycerol is enough for up to 50 samples. Scale
up the dilution for additional samples.
4.B. Preparing Maxwell® DE Lysis Mix
- Determine the number of extractions to be performed. Increase this number by 1 or 2 to compensate for pipetting error.
- Use Table 1 to calculate each component volume required to prepare sufficient Maxwell ® DE lysis mix for the extraction number determined in Step 1.
Table 1. Preparing Lysis Mix.
**** Reagent| Volume per Extraction| ×| Number of
Extractions| =| Final Volume
---|---|---|---|---|---
Maxwell® DE Lysis Buffer| 390µl| ×| | =|
Proteinase K| 10µl| ×| | =|
Note: Do not store this dilution; prepare fresh Maxwell® DE lysis mix for each use.
- Vortex for 10 seconds at maximum speed to thoroughly mix.
4.C. Preparing Maxwell® DE Elution Mix
- Determine the number of extractions to be performed. Increase this number by 1 or 2 to compensate for pipetting error.
- Use Table 2 to calculate each component volume required to prepare sufficient Maxwell ® DE elution mix for the extraction number determined in Step 1.
Table 2. Preparing Elution Mix.
** Reagent| Volume per Extraction| ×| Number of
Extractions| =| Final Volume**
---|---|---|---|---|---
Maxwell® DE Elution Buffer| 198µl| ×| | =|
Proteinase K| 1µl| ×| | =|
Diluted 1-Thioglycerol, (prepared in Section 4.A)| 1µl| ×| | =|
Note: Do not store this dilution; prepare fresh Maxwell® DE elution mix for each use.
- Vortex for 10 seconds at maximum speed to thoroughly mix.
4.D. Preprocessing Samples using Spin Baskets and Click Fit Microtubes, 1.5ml
-
Place a solid substrate at the bottom of a labeled Click Fit Microtube.
-
Add 400µl of Maxwell® DE lysis mix (prepared in Section 4.B) to each tube, ensuring that the substrate is completely covered.
-
Close the lid of each tube and vortex samples at maximum speed for 10 seconds.
-
Place the samples in a 70°C heat block or water bath and incubate for 10 minutes. After 10 minutes, remove the tubes and vortex for 10 seconds. Return the tubes to the 70° heat block or water bath and incubate for an additional 10 minutes.
Note: Do not use an incubator to incubate tubes. Heat transfer is inefficient and will result in poor performance. -
After the 70°C incubation, use clean forceps to carefully transfer solid substrate from the Click Fit Microtube (leaving lysis mix behind) to a clean DNA IQ™ Spin Basket, then place the DNA IQ™ Spin Basket containing the solid substrate back into the same Click Fit Microtube. Close the tube lid.
Notes:
a. Alternatively, for each sample processed, place a DNA IQ™ Spin Basket into a clean, labeled Click Fit Microtube. Carefully transfer the substrate to the spin basket in the tube with the corresponding label. Transfer the liquid lysate from the incubation tube to the same spin basket and close the tube. Additional Click Fit Microtubes are available for purchase (see Section 9).
b. Carefully open tubes. Some condensation may be present on the cap of the tube following incubation.
c. Do not centrifuge samples before transferring to a Spin Basket.
d. Only use the DNA IQ™ Spin Baskets that were provided with the Maxwell® DE System; other spin baskets (e.g., CW Spin Baskets Cat.# AS8101) are not compatible with the Maxwell ® DE System. Should additional DNA IQ™ Spin Baskets be needed, they are available for purchase (see Section 9). -
Centrifuge at room temperature for 5 minutes at maximum speed in a microcentrifuge (~16,000–20,000 × g). Carefully remove the Spin Basket without disrupting the pellet. Transfer the supernatant (non-sperm fraction) to a clean, labeled Click Fit tube, leaving about 50µl of supernatant and the entire pellet behind (sperm fraction). Close the caps of the tubes that contain the non-sperm fraction.
-
Place the closed ClickFit Microtubes containing the non-sperm fractions into a 95°C heat block or water bath and incubate for 20 minutes. After incubation, retain the non-sperm fraction for downstream processing.
Notes:
a. The non-sperm fraction can be stored at –30°C to +10°C for at least 3 months.
b. The non-sperm fraction is directly compatible with Promega short-tandem repeat (STR) chemistries, including the Power Quant® and Power Plex ® systems (see Section 7 for a full list of recommendations).
c. If using non-Promega products to analyze the non-sperm fraction, a DNA purification protocol, such as the Maxwell ® FSC DNA IQ™ Casework Kit (Cat.# AS1550), may be required. -
Add 900µl of Maxwell® DE Resuspension Buffer to the sperm fraction. Resuspend pellet by either capping the tube and vortexing or vigorously pipetting up and down.
-
The sample is now ready for automated differential extraction using the Maxwell® Instrument.
Preparing the Maxwell® DE System Cartridge for Use with the Maxwell® FSC,
Maxwell® RSC or Maxwell® RSC 48 Instrument
Table 3. Maxwell® Instruments and Associated Manuals. For detailed usage information, refer to the operating manual specific to your Maxwell® Instrument:
Instrument | Operating Manual |
---|---|
Maxwell® RSC | TM411 |
Maxwell® RSC 48 | TM510 |
Maxwell® FSC | TM462 |
Before beginning purification, ensure that the Maxwell DE System method has
been loaded onto the Maxwell® Instrument.
Please see the section titled “Importing and Deleting Methods” in the Maxwell®
operating manual for further instructions on how to load method files.
-
Change gloves before handling Cartridges, Plungers and Elution Tubes. Place the appropriate number of cartridges in the Maxwell® Cartridge Rack. Press down on both ends of the cartridge to snap it into position.
-
Carefully peel the seal off the Maxwell cartridges. Rotate the cartridge rack so that well #8 is closest to you. Well #8 is the position closest to the Elution Tube (Figure 1).
Note: Clean sample or reagent spills on any part of the Maxwell ® Cartridge Rack with a detergent-water solution, followed by 70% ethanol, then water. Do not use bleach on any instrument parts.
User Adds to Wells
1. Processed sample
8. Plunger
4. Wash Solution -
Place a Plunger into well #8 of each cartridge (Figure 1).
Note: Only use the Plungers provided with the Maxwell® DE System; other plungers are not compatible with the Maxwell® DE System. -
Place labeled Elution Tubes in the Maxwell® Cartridge Rack with the caps facing away from the Maxwell® Cartridges (Figure 2). Add 200µl of Maxwell® DE elution mix (prepared in Section 4.C) to each tube.
Notes:
a. Make sure that the Elution Tubes are pressed all the way down.
b. Some evaporation will occur during elution. Using smaller volumes of Maxwell® DE elution mix could affect DNA recovery and risks completely drying the sample.
c. Ensure that the Maxwell ® DE elution mix is in the bottom of the tube. If Maxwell ® DE elution mix is on the side of the tube, the elution may be suboptimal.
d. Use only the Elution Tubes provided in this kit and the Maxwell® DE elution mix prepared in Section 4.C of this protocol.
Figure 2. Setup and configuration of the deck tray. Maxwell ® DE elution mix is added to the elution tubes as shown.
Plungers are in well #8 of the cartridge. -
Change gloves again. Transfer the entire contents of each sample tube containing the resuspended Sperm Fraction (Section 4.D, Step 9) into well #1 of each Maxwell ® cartridge (Figure 1).
-
Proceed to Section 6 to run the Maxwell ® DE System method.
Maxwell® Instrument Run
The Maxwell® DE System method takes approximately 70 minutes to run. For
detailed information, refer to the Operating Manual specific to your Maxwell®
Instrument. See Table 3 (Section 5).
-
Turn on the Maxwell® Instrument and Tablet PC. Log into the Tablet PC and start the Maxwell ® software by double-touching the icon on the desktop. The instrument will proceed through a self-check and home all moving parts.
-
Touch Start on the ‘Home’ screen.
-
On the ‘Methods’ screen, select a method using one of the two options below:
a. Touch the Maxwell DE System method from the list.
b. Use a bar code reader to scan the 2D bar code on the kit box to automatically select the appropriate method. -
Verify that the Maxwell DE System method has been selected, and touch the Proceed button. If requested by the software, enter any kit lot and expiration information that has been required by the Administrator.
-
On the ‘Cartridge Setup’ screen, confirm that the Maxwell DE System method is displayed at the top of the screen.
Touch the cartridge positions to select or deselect any positions to be used for this extraction run. Enter any required sample tracking information, and touch the Proceed button to continue.
Note: When using the Maxwell ® RSC 48 Instrument, press the Front or Back button to select or deselect cartridge positions for the appropriate deck tray. -
After the door has been opened, confirm that all Extraction Checklist items have been performed. Verify that samples were added to well #1 of the cartridges, cartridges are loaded on the instrument, uncapped Elution Tubes are present with elution mix, and plungers are in well #8. Transfer the deck tray(s) containing the prepared cartridges onto the Maxwell® Instrument platform. Inserting the Maxwell® deck tray(s): Hold the deck tray by the sides to avoid dislodging cartridges from the deck tray. Ensure that the deck tray is placed in the Maxwell® Instrument with the Elution Tubes closest to the door. Angle the back of the deck tray downward and place into the instrument so that the back of the deck tray is against the back of the instrument platform. Press down on the front of the deck tray to firmly seat the deck tray on the instrument platform. If you have difficulty fitting the deck tray on the platform, check that the deck tray is in the correct orientation. Ensure the deck tray is level on the instrument platform and fully seated.
Note: Check the identifier on 24-position Maxwell ® deck trays to determine whether they should be placed in the front or back of the instrument. -
Touch the Start button to begin the method. The platform will retract, and the door will close. Warning: Pinch point hazard.
Note: If using a 48-position Maxwell® Instrument and the Vision System has been enabled, the deck trays will be scanned as the platform retracts. Any errors in deck tray setup (e.g., plungers not in well #8, Elution Tubes not present and open) will cause the software to return to the ‘Cartridge Setup’ screen and problem positions will be marked with an exclamation point in a red circle. Touch the exclamation point for a description of the error and resolve all error states. Touch the Start button again to repeat deck tray scanning and begin the extraction run. -
The Maxwell® Instrument will immediately proceed with the Maxwell ® DE System run. The screen will display the steps performed and the approximate time remaining in the run.
Notes:
a. Pressing the Abort button will abandon the run.
b. If the run is abandoned before completion, you may be prompted to check whether plungers are still loaded on the plunger bar. If plungers are present on the plunger bar, you should perform Clean Up when requested. If plungers are not present on the plunger bar, you can choose to skip Clean Up when requested. The samples will be lost. -
When the automated Maxwell ® DE System run is complete, the tablet screen will display a message that the method has ended.
Notes:
a. We do not recommend leaving the finished eluate sitting in the Maxwell ® Instrument as additional evaporation may occur.
b. Some evaporation will occur during the elution step.
End of Run -
Follow the on-screen instructions at the end of the method to open the instrument door. Verify that the plungers are located in well #8 of the cartridges. If plungers are not removed from the plunger bar, follow the instructions in the technical manual appropriate to your Maxwell ® Instrument (see Table 3) to perform a Clean Up process to attempt to unload the plungers.
-
Remove the deck tray(s) from the instrument immediately following the run to prevent evaporation of the eluates. Close the Elution Tubes containing the sperm fraction, and remove them. Note: Following the automated differential extraction procedure, the deck tray(s) will be warm. To remove a deck tray from the instrument platform, hold onto the deck tray by its sides. Ensure samples are removed from the instrument before running a UV sanitation protocol to avoid damage to the nucleic acid.
-
Remove the cartridges and plungers from the Maxwell ® deck tray(s). Discard as hazardous waste according to your institution’s procedures. Do not reuse Maxwell ® DE Cartridges, DE Plungers or Elution Tubes.
-
Place the closed Elution Tubes containing the sperm fractions into a 95°C heat block or water bath and incubate for 20 minutes.
Notes:
a. The sperm fraction can be stored at –30°C to +10°C for at least 3 months.
b. The sperm fraction is directly compatible with Promega short-tandem repeat (STR) chemistries, including the Power Quant® and Power Plex ® systems (see Section 7 for a full list of recommendations).
c. If using non-Promega products to analyze the sperm fraction, a DNA purification protocol, such as the Maxwell ® FSC DNA IQ™ Casework Kit (Cat.# AS1550), may be required.
Storing and Using Non-Sperm and Sperm Fractions in Downstream
Applications
The non-sperm and sperm fractions can be stored at –30°C to +10°C for at least 3 months.
7.A. Recommendations for Using the Power Quant® System
The amount of human genomic DNA present in the non-sperm and sperm fractions
can be quantified using the Power Quant ® System. Follow the protocol in the
Power Quant® System Technical Manual #TMD047 without any changes, using 2µl of
the non-sperm or sperm fraction per 20µl of Power Quant® System amplification
reaction. In addition, the human DNA quality in these extracts can be
evaluated using the Power Quant® data. The ratio of the autosomal-to-
degradation target quantification results can indicate whether or not the
human DNA is degraded, whereas the ratio of the autosomal-to-Y target
quantification results can provide information on the ratio of female-to-male
DNA in the sample. The Power Quant ® IPC target performance can indicate
whether PCR inhibitors are present, which are likely to inhibit downstream STR
amplification.
7.B. Recommendations for Using the Plexor
®HY System The amount of human genomic DNA in the non-sperm and sperm
fractions can be quantified using the Plexor ® HY System if 5X Amp Solution™
Reagent (Cat.# DM1231) is added to the DNA quantification reaction. The non-
sperm and sperm fractions will inhibit qPCR amplification if 5X Amp Solution™
Reagent is not added to the reaction. Include the 5X Amp Solution™ Reagent in
the DNA standard curve reactions as well as in the non-sperm and/or sperm
fraction amplifications. In addition to quantification, the ratio of the
autosomal-to-Y target quantification results can provide information on the
ratio of female-to-male DNA in the sample, whereas the Plexor ® HY IPC target
can indicate whether or not PCR inhibitors are present that are likely to
inhibit downstream STR amplification. Modify the Plexor ® HY reaction mix
described in the reaction setup section of the instrument-specific Plexor ® HY
System Technical Manual as described in Table 4.
Table 4. qPCR Amplification Mix for the Plexor ® HY System.
Component | Volume per Reaction |
---|---|
Water, Amplification Grade | 3µl |
Plexor® HY 2X Master Mix | 10µl |
Plexor® HY 20X Primer/IPC Mix | 1µl |
5X AmpSolution™ Reagent | 4µl |
Total volume | 18µl |
Add 2µl of extract to 18µl of Plexor® HY reaction mix for a 20µl final reaction volume.
7.C. Recommendations for Using the Power Plex ®ESI Fast and ESX Fast
Systems
The Power Plex® ESI Fast and ESX Fast Systems require 5X Amp Solution™ Reagent
for efficient amplification of the non-sperm and sperm fractions (see Table
5).
Table 5. PCR Amplification Mix for Power Plex® ESI Fast and ESX Fast
Systems.
PCR Amplification Mix Component| Volume Per
Reaction| ×| Number of
Reactions| =| Final Volume
---|---|---|---|---|---
PowerPlex® ESI/ESX Fast 5X Master Mix| 5.0μl| ×| | =|
PowerPlex® ESI 16/17 or ESX 16/17 Fast 10X Primer Pair Mix| 2.5μl| ×| | =|
5X AmpSolution™ Reagent| 2.5μl| ×| | =|
Total reaction mix volume| 10.0μl
Add up to 15μl of non-sperm or sperm fraction to 10μl of amplification
reaction mix.
Perform thermal cycling and subsequently analyze the amplified products using
capillary electrophoresis as described in the technical manuals for the
PowerPlex ® ESI Fast or ESX Fast System, as appropriate.
7.D. Amplifying with Power Plex ® Systems That Do Not Require 5X Amp
Solution™ Reagent
Amplification with the eight-dye Power Plex ® systems (Power Plex ® 35GY and
Power Plex ® 18E Systems) do not require 5X Amp Solution™ Reagent. The Power
Plex ® Fusion, Power Plex ® Fusion 6C, Power Plex ® 21 and Power Plex ® Y23
Systems do not require 5X Amp Solution™ Reagent. Set up the reaction for each
Power Plex ® System in the same way according to the corresponding technical
manual. Power Plex ® Fusion 6C (Table 6) and Power Plex ® Y23 Systems (Table
8) are shown as examples below.
Note: In some cases, partial inhibition may be seen with a maximal sample
volume of 15µl. This is manifested by increased baseline noise and reduced
heights for some larger amplicons. This can be mitigated by adding 1µl of 5X
Amp Solution™ Reagent to the 25µl Power Plex ® amplification reaction and
reducing the maximum sample volume to 14µl as shown in Table 7 (except for the
Power Plex ® Y23 System, where including 1µl of 5X Amp Solution™ Reagent
increases the maximum sample volume to 16.5µl as shown in Table 9).
7.D. Amplification with Power Plex® Systems Not Requiring 5X Amp Solution™
Reagent (continued)
Table 6. PCR Amplification Mix for Power Plex ® Fusion 6C System.
PCR Amplification Mix Component| Volume Per
Reaction| ×| Number of
Reactions| =| Final Volume
---|---|---|---|---|---
PowerPlex®Fusion 6C 5X Master Mix| 5µl| ×| | =|
PowerPlex® Fusion 6C 5X Primer Pair Mix| 5µl| ×| | =|
Total reaction mix volume| 10µl| ×| | =|
Add up to 15µl of non-sperm or sperm fraction to 10µl of amplification reaction mix. This setup will be the same for Power Plex® 21 and Power Plex® Fusion kits, using 10μl of amplification reaction mix.
Table 7. PCR Amplification Mix for Power Plex® Fusion 6C System with 5X Amp Solution™ Reagent.
CR Amplification Mix Component| Volume Per Reaction| Number of
Reactions| Final Volume
---|---|---|---
PowerPlex® Fusion 6C 5X Master Mix| 5 µl| x| =
PowerPlex® Fusion 6C 5X Primer Pair Mix| 5 µl| x| =
5X AmpSolution™ Reagent| 1 µl| x| =
Total reaction mix volume| 11 µl| x| =
Add up to 14µl of non-sperm or sperm fraction to 11µl of amplification
reaction mix. This setup will be the same for Power Plex® 21 and Power Plex ®
Fusion kits, using 11μl of amplification reaction mix.
Table 8. PCR Amplification Mix for Power Plex® Y23 System.
PCR Amplification Mix Component| Volume Per Reaction| Number of
Reactions| Final Volume
---|---|---|---
PowerPlex® Y23 5X Master Mix| 5.0 µl| x| =
PowerPlex® Y23 10X Primer Pair Mix| 2.5 µl| x| =
Water, Amplification Grade| 2.5 µl| x| =
Total reaction mix volume| 10.0 µl| x| =
Add up to 15µl of non-sperm or sperm fraction to 10µl of amplification reaction mix.
Table 9. PCR Amplification Mix for Power Plex® Y23 System with 5X Amp Solution™ Reagent.
PCR Amplification Mix Component| Volume Per Reaction| Number of
Reactions| Final Volume
---|---|---|---
PowerPlex®Y23 5X Master Mix| 5.0 µl| x| =
PowerPlex® Y23 10X Primer Pair Mix| 2.5 µl| x| =
5X AmpSolution™ Reagent| 1.0µl| x| =
Total reaction mix volume| 8.5µl| x| =
Add up to 16.5µl of non-sperm or sperm fraction to 8.5µl of amplification
reaction mix.
Perform thermal cycling and subsequent analysis of amplified products by
capillary electrophoresis as described in the technical manuals for the Power
Plex ® Fusion, Power Plex ® Fusion 6C, Power Plex ® 21 or Power Plex ® Y23
System, as appropriate.
7.E. Recommendations for Using Other Quantification and STR Systems and
Applications
If a non-Promega chemistry is used for human DNA quantification or STR
analysis, you may need to further purify the fractions. We recommend that the
sperm and non-sperm fractions be cleaned up using the Maxwell ® FSC DNA IQ™
Casework Kit (Cat# AS1550), following an abridged protocol for Section 3.B
Extraction of Liquid Samples in the Maxwell ® FSC DNA IQ Casework Kit
Technical Manual #TM499. The abridged protocol begins with Step 4 (skipping
Steps 1–3) and continues through the remaining steps. Use a maximum of 400μl
of sperm or non-sperm fraction per purification.
Troubleshooting
For questions not addressed here, please contact your local Promega Branch Office or Distributor. Contact information available at: www.promega.com. Email: genetic@promega.com
Symptoms | Possible Causes and Comments |
---|---|
Low DNA yield in sperm fraction | Yields can be influenced by sample |
properties, such as substrates or other materials present.
Certain materials, such as blood, may result in lower yields.
The sperm pellet might have been lost during the preprocessing step. Do not
aspirate or otherwise disrupt the pellet before resuspending in Section 4.D,
Step 8.
An old 1-Thioglycerol dilution may have been used. Ensure that all
1-Thioglycerol dilutions are freshly made for each use.
PCR inhibition in sperm or non-sperm fraction| The fraction may contain a
sample-derived PCR inhibitor. Purify the DNA using a kit such as the Maxwell ®
FSC DNA IQ™ Casework Kit (Cat.# AS1550).
Fractions are compatible with Promega PCR chemistries. If you are using a
different PCR chemistry, you may need to purify DNA first (see Section 7.E).
Certain Promega chemistries will require the use of 5X Amp Solution™ Reagent.
See Section 7.
Elution tubes are empty following a run| An insufficient volume of elution
mix might have been added to the elution tubes. Some amount of evaporation
will occur during the elution step Maxwell Differential Extraction method.
The tubes were left open on the Maxwell ® deck too long after
completion of the run, allowing time for additional evaporation.
An incompatible plunger was used. Make sure to only use plungers supplied
with the kit.
Instrument errors| Verify that nothing is physically blocking the movement of
the platform, plunger bar or magnetic rod assembly.
Perform a Self Test from the Settings menu. The instrument will rehome itself.
If the error recurs, contact Promega for service.
The cartridges were not completely seated on the platform.
Ensure the cartridges are pressed firmly into place.
Incorrect elution tube was used. Use only the Elution Tube, 0.5ml, provided
with the Maxwell ® DE System. Other tubes may have different dimensions.
Resin carryover during elution| The presence of a small amount of resin
particles in the Elution Tube will not affect the final DNA concentration or
downstream applications. If desired, final elution tubes can be centrifuged to
pellet resin and eluates can be transferred to a clean tube or an additional
resin capture step may be performed using the 0.5ml MagneSphere
® Technology Magnetic Separation Stand (Cat.# Z5341).
Plungers on rod after a run| Consult the appropriate Maxwell ® instrument
operating manual (see Table 3, Section 5) and perform the indicated Clean Up
protocols.
Related Products
Product | Size | Cat.# |
---|---|---|
Maxwell® FSC Instrument | each | AS4600 |
Maxwell® RSC Instrument | each | AS4500 |
Maxwell ® RSC 48 Instrument | each | AS8500 |
ClickFit Microtube, 1.5ml | 100/pack | V4745 |
DNA IQ™ Spin Baskets | 50/pack | V1225 |
Elution Tubes, 0.5ml | 50/pack | AS7201 |
(a) Patent Pending.
© 2024 Promega Corporation. All Rights Reserved.
Magne Sphere, Maxwell, Plexor and Power Plex are registered trademarks of
Promega Corporation. Amp Solution and DNA IQ, are trademarks of Promega
Corporation.
Products may be covered by pending or issued patents or may have certain
limitations. Please visit our website for more information.
All prices and specifications are subject to change without prior notice.
Product claims are subject to change. Please contact Promega Technical
Services or access the Promega online catalog for the most up-to-date
information on Promega products.
Promega Corporation · 2800 Woods Hollow Road · Madison, WI 53711-5399 USA ·
Toll Free in USA 800-356-9526 ·
608-274-4330 · Fax
608-277-2516
www.promega.com
TM734 · 6/24
References
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